Local analysis of manually imported sequence data. German environmental samples are excluded from dashboards.
cov atlas
192,940 rows | Latest collection 2026-10-20 | Updated 2026-10-28 17:34

Detect and analyze SARS-CoV-2 variants

Search lineages and mutations across your manually imported sequence data, filtered by time and geography.

192,940 sequences Collection - to 2026-10-20 data source: gisaid + genbase + genbank (deduplicated)
Query matches every sequence in this window: share is 100% by definition and growth is 0%.
Recent share (2 mo)
100.0%
8,334 of 8,334 samples in 2026-W35..2026-W43
Growth advantage
+0.0%
per week, log-odds regression over 0 qualified weeks
Matched samples
100.0%
21,814 of 21,814 time/location-matched sequences
Model fit
-
R2; values below 0.30 are low confidence

All lineages

Share by ISO week using collection date.
Query shareWeekly sample volume
0.0%50.0%100.0% 2026-W172026-W202026-W232026-W262026-W292026-W322026-W352026-W382026-W412026-W43

Top Lineages

Exact assigned lineages ranked within the selected date and location.

Recent Weekly Values

WeekMatchedTotalShare
2026-W32 965 965 100.0%
2026-W33 1,064 1,064 100.0%
2026-W34 1,190 1,190 100.0%
2026-W35 1,311 1,311 100.0%
2026-W36 1,422 1,422 100.0%
2026-W37 1,449 1,449 100.0%
2026-W38 1,366 1,366 100.0%
2026-W39 1,232 1,232 100.0%
2026-W40 1,010 1,010 100.0%
2026-W41 453 453 100.0%
2026-W42 81 81 100.0%
2026-W43 10 10 100.0%

Values by Country

CountryMatchedTotalShare
USA 5,485 5,485 100.0%
Australia 2,554 2,554 100.0%
Spain 2,136 2,136 100.0%
Canada 2,107 2,107 100.0%
Singapore 1,750 1,750 100.0%
China 1,146 1,146 100.0%
United Kingdom 704 704 100.0%
Brazil 645 645 100.0%
South_Korea 600 600 100.0%
France 496 496 100.0%
Japan 443 443 100.0%
New_Zealand 342 342 100.0%
Russia 311 311 100.0%
Costa_Rica 270 270 100.0%
Ireland 257 257 100.0%
Mexico 256 256 100.0%
Thailand 251 251 100.0%
Israel 188 188 100.0%
Norway 181 181 100.0%
Germany 151 151 100.0%
Sweden 141 141 100.0%
Portugal 126 126 100.0%
Malaysia 122 122 100.0%
India 121 121 100.0%
Guatemala 106 106 100.0%
Iran 106 106 100.0%
Egypt 104 104 100.0%
Italy 98 98 100.0%
Netherlands 88 88 100.0%
Cambodia 82 82 100.0%
Pakistan 58 58 100.0%
Luxembourg 49 49 100.0%
Dominican_Republic 44 44 100.0%
Belgium 41 41 100.0%
South_Africa 36 36 100.0%
Haiti 26 26 100.0%
Denmark 21 21 100.0%
Ukraine 20 20 100.0%
Colombia 19 19 100.0%
Argentina 13 13 100.0%
Ecuador 13 13 100.0%
Croatia 11 11 100.0%
Czech_Republic 11 11 100.0%
Senegal 11 11 100.0%
Kenya 9 9 100.0%
Poland 9 9 100.0%
Palau 8 8 100.0%
Vietnam 8 8 100.0%
Chile 7 7 100.0%
Slovenia 7 7 100.0%
Uganda 7 7 100.0%
Indonesia 4 4 100.0%
Bonaire 3 3 100.0%
Peru 3 3 100.0%
Slovakia 3 3 100.0%
Romania 2 2 100.0%
Estonia 1 1 100.0%
Laos 1 1 100.0%
Madagascar 1 1 100.0%
Micronesia 1 1 100.0%